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Protein folding

Abstract:


Recent studies of the relationship between protein sequence and protein structure are reviewed. A detailed discussion of past attempts to predict the structure of a protein from its amino acid sequence, the protein folding problem, is presented and the strengths and weaknesses of these methods are examined. The root-mean-square deviation is studied and a benchmark for structural comparisons is established. A combinatorial approach to the protein folding problem is outlined and its advantages over existing methods is discussed. Specific algorithms based on the combinatorial approach are developed and applied to a variety of proteins. The success of this approach in terms of the root-mean-square deviation benchmark as well as the drawbacks of this method are presented.

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Institution:
University of Oxford
Department:
Life and Environmental Sciences Division
Role:
Author

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Role:
Supervisor
Role:
Supervisor
Role:
Supervisor
Role:
Supervisor


Publication date:
1980
Type of award:
DPhil
Level of award:
Doctoral
Awarding institution:
University of Oxford


Language:
English
Subjects:
UUID:
uuid:b2c493ae-3d76-47e4-b71e-d3e345924d71
Local pid:
td:603839165
Source identifiers:
603839165
Deposit date:
2013-01-21

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