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Thesis

Using molecular simulations to parameterize discrete models of protein movement in the membrane

Abstract:

The work presented in this thesis centres on the development of a work-flow in which coarse-grained molecular dynamics (MD) simulations of a planar phospholipid bilayer, containing membrane proteins, is used to parameterize a larger-scale simplified bilayer model. Using this work-flow, repeat simulations and simulations of larger systems are possible, better enabling the calculation of bulk statistics for the system. The larger-scale simulations can be run on commercial hardware, once...

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Division:
MPLS
Department:
Doctoral Training Centre - MPLS
Role:
Author

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Role:
Supervisor
Role:
Supervisor
Role:
Supervisor
Engineering and Physical Sciences Research Council More from this funder
Type of award:
DPhil
Level of award:
Doctoral
Awarding institution:
University of Oxford
UUID:
uuid:893568e9-696f-47e7-8495-59ecfb810459
Deposit date:
2015-10-21

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