Journal article
Bringing numerous methods for expression and promoter analysis to a public cloud computing service
- Abstract:
- Every year, a large number of novel algorithms are introduced to the scientific community for a myriad of applications, but using these across different research groups is often troublesome, due to suboptimal implementations and specific dependency requirements. This does not have to be the case, as public cloud computing services can easily house tractable implementations within self-contained dependency environments, making the methods easily accessible to a wider public. We have taken 14 popular methods, the majority related to expression data or promoter analysis, developed these up to a good implementation standard and housed the tools in isolated Docker containers which we integrated into the CyVerse Discovery Environment, making these easily usable for a wide community as part of the CyVerse UK project.
- Publication status:
- Published
- Peer review status:
- Peer reviewed
Actions
Access Document
- Files:
-
-
(Preview, Version of record, 81.7KB, Terms of use)
-
- Publisher copy:
- 10.1093/bioinformatics/btx692
Authors
- Publisher:
- Oxford University Press
- Journal:
- Bioinformatics More from this journal
- Volume:
- 34
- Issue:
- 5
- Pages:
- 884-886
- Place of publication:
- England
- Publication date:
- 2017-11-06
- Acceptance date:
- 2017-11-03
- DOI:
- EISSN:
-
1367-4811
- ISSN:
-
1367-4803
- Pmid:
-
29126246
- Language:
-
English
- Keywords:
- Pubs id:
-
1101053
- Local pid:
-
pubs:1101053
- Deposit date:
-
2022-01-27
Terms of use
- Copyright holder:
- Polański et al.
- Copyright date:
- 2017
- Rights statement:
- © The Author 2017. Published by Oxford University Press. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
- Licence:
- CC Attribution (CC BY)
If you are the owner of this record, you can report an update to it here: Report update to this record