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A practical guide to stochastic simulations of reaction-diffusion processes

Abstract:

A practical introduction to stochastic modelling of reaction-diffusion processes is presented. No prior knowledge of stochastic simulations is assumed. The methods are explained using illustrative examples. The article starts with the classical Gillespie algorithm for the stochastic modelling of chemical reactions. Then stochastic algorithms for modelling molecular diffusion are given. Finally, basic stochastic reaction-diffusion methods are presented. The connections between stochastic simul...

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Institution:
University of Oxford
Department:
Oxford, MPLS, Mathematical Inst
Chapman, J More by this author
Publication date:
2007-04-15
URN:
uuid:ee4fd1ae-31a5-4ba7-a777-a9711ea88bea
Source identifiers:
146803
Local pid:
pubs:146803

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