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Dynamic bacterial growth modulation in structurally distinct and functionally tuneable agarose hydrogels

Abstract:
Bacterial adaptability to diverse environments drives infection, persistence, and antibiotic resistance. Although hydrogels are increasingly used to model such conditions, the factors governing hydrogel-dependent bacterial growth is complex. Here, we focus on agarose hydrogels and investigate how their material properties influence bacterial proliferation. Using two agarose types – hydroxyethyl substituted and unsubstituted – at varying concentrations, we tested four bacterial species (E. coli, P. fluorescens, S. aureus, B. subtilis) across five nutrient media yielding 120 conditions. Growth consistently decreased with increasing hydrogel stiffness and water loss in unsubstituted and substituted agarose hydrogels, regardless of species. Media effects were largely due to their impact on hydrogel properties rather than nutrient content. Furthermore, electrostatic repulsion between Gram positive bacteria and anionic unsubstituted agarose suppressed growth in high concentration gels. These findings demonstrate that bacterial growth in agarose systems is primarily shaped by gel mechanics and surface interactions, informing the design of infection models and antibacterial materials.
Publication status:
Published
Peer review status:
Peer reviewed

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Publisher copy:
10.1038/s43246-025-01067-9

Authors

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Role:
Author
ORCID:
0000-0002-1304-8690
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Institution:
University of Oxford
Division:
MSD
Department:
Nuffield Department of Population Health
Sub department:
Big Data Institute
Role:
Author
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Role:
Author
ORCID:
0000-0002-2092-0555
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Role:
Author
ORCID:
0000-0002-3166-1798


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Funder identifier:
10.13039/501100004443
Grant:
Chancellor’s International Scholarship (2020-2024)


Publisher:
Nature Research
Journal:
communications materials More from this journal
Volume:
7
Issue:
1
Article number:
57
Publication date:
2026-01-22
Acceptance date:
2025-12-31
DOI:
EISSN:
2662-4443
ISSN:
2662-4443


Language:
English
Keywords:
Pubs id:
2365204
Local pid:
pubs:2365204
Source identifiers:
3750114
Deposit date:
2026-02-11
ARK identifier:
This ORA record was generated from metadata provided by an external service. It has not been edited by the ORA Team.

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