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Journal article

HIV-1 sequence data coverage in Central East Africa from 1959 to 2013

Abstract:

Central and Eastern African HIV sequence data have been most critical in understanding the establishment and evolution of the global HIV pandemic. Here we report on the extent of publicly available HIV genetic sequence data in the Los Alamos National Laboratory Sequence Database sampled from 1959 to 2013 from six African countries: Uganda, Kenya, Tanzania, Burundi, the Democratic Republic of Congo, and Rwanda. We have summarized these data, including HIV subtypes, the years sampled, and the genomic regions sequenced. We also provide curated alignments for this important geographic area in five HIV genomic regions with substantial coverage.

Publication status:
Published
Peer review status:
Peer reviewed

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Publisher copy:
10.1089/aid.2016.0079

Authors

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Institution:
University of Oxford
Division:
MSD
Department:
NDM
Sub department:
Human Genetics Wt Centre
Role:
Author


Publisher:
Mary Ann Liebert
Journal:
AIDS Research and Human Retroviruses More from this journal
Volume:
32
Issue:
9
Pages:
904-908
Publication date:
2016-08-02
Acceptance date:
2016-07-06
DOI:
EISSN:
1931-8405
ISSN:
0889-2229


Language:
English
Keywords:
Pubs id:
pubs:675657
UUID:
uuid:c1211de3-4d50-4247-9aa4-57722e0778ed
Local pid:
pubs:675657
Source identifiers:
675657
Deposit date:
2017-03-22
ARK identifier:

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