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SpineNet: automatically pinpointing classification evidence in spinal MRIs

Abstract:
We describe a method to automatically predict radiological scores in spinal Magnetic Resonance Images (MRIs). Furthermore, we also identify and localize the pathologies that are the reasons for these scores. We term these pathological regions the ``evidence hotspots'. Our contributions are two fold: (i) a Convolutional Neural Network (CNN) architecture and training scheme to predict multiple radiological scores on multiple slice sagittal MRIs. The scheme uses multi-task CNN training with augmentation, and handles the class imbalance common in medical classification tasks. (ii) the prediction of a heat-map of evidence hotspots for each score. For both of these, all that is required for training is the class label of the disc or vertebrae, no stronger supervision (such as slice labels) is needed. We report state-of-the-art and near-human performances across multiple radiological scorings including: Pfirrmann grading, disc narrowing, endplate defects, and marrow changes.
Publication status:
Accepted
Peer review status:
Peer reviewed

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Publisher copy:
10.1007/978-3-319-46723-8_20

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Institution:
University of Oxford
Division:
MPLS
Department:
Engineering Science
Role:
Author


Publisher:
Springer International Publishing AG
Host title:
MICCAI 2016: Medical Image Computing and Computer-Assisted Intervention – MICCAI 2016
Journal:
19th International Conference on Medical Image Computing and Computer Assisted Intervention More from this journal
Volume:
9901
Pages:
166-175
Series:
Lecture Notes in Computer Science
Publication date:
2016-10-02
Acceptance date:
2016-03-17
Event location:
Athens Greece
DOI:
ISBN:
9783319467238


Keywords:
Pubs id:
pubs:630575
UUID:
uuid:b4ad2978-5068-4627-9752-2522cf83830b
Local pid:
pubs:630575
Source identifiers:
630575
Deposit date:
2016-06-29

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