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Caffeine inhibits Notum activity by binding at the catalytic pocket

Abstract:
Notum inhibits Wnt signalling via enzymatic delipidation of Wnt ligands. Restoration of Wnt signalling by small molecule inhibition of Notum may be of therapeutic benefit in a number of pathologies including Alzheimer’s disease. Here we report Notum activity can be inhibited by caffeine (IC50 19 µM), but not by demethylated caffeine metabolites: paraxanthine, theobromine and theophylline. Cellular luciferase assays show Notum-suppressed Wnt3a function can be restored by caffeine with an EC50 of 46 µM. The dissociation constant (Kd) between Notum and caffeine is 85 µM as measured by surface plasmon resonance. High-resolution crystal structures of Notum complexes with caffeine and its minor metabolite theophylline show both compounds bind at the centre of the enzymatic pocket, overlapping the position of the natural substrate palmitoleic lipid, but using different binding modes. The structural information reported here may be of relevance for the design of more potent brain-accessible Notum inhibitors.
Publication status:
Published
Peer review status:
Peer reviewed

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Publisher copy:
10.1038/s42003-020-01286-5

Authors


More by this author
Institution:
University of Oxford
Division:
MSD
Department:
NDM
Sub department:
Structural Biology
Role:
Author
ORCID:
0000-0001-8916-8552
More by this author
Institution:
University of Oxford
Division:
MSD
Department:
NDM
Sub department:
Structural Biology
Role:
Author
ORCID:
0000-0003-4015-1404
More by this author
Role:
Author
ORCID:
0000-0002-4617-8504
More by this author
Institution:
University of Oxford
Division:
MSD
Department:
NDM
Sub department:
NDM Strategic
Role:
Author
ORCID:
0000-0002-3834-1893


Publisher:
Springer Nature
Journal:
Communications Biology More from this journal
Volume:
3
Issue:
1
Article number:
555
Place of publication:
England
Publication date:
2020-10-08
Acceptance date:
2020-08-04
DOI:
EISSN:
2399-3642
Pmid:
33033363


Language:
English
Keywords:
Pubs id:
1136832
Local pid:
pubs:1136832
Deposit date:
2021-02-27

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