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Journal article

Visualizing profile-profile alignment: pairwise HMM logos.

Abstract:

UNLABELLED: The availability of advanced profile-profile comparison tools, such as PRC or HHsearch demands sophisticated visualization tools not presently available. We introduce an approach built upon the concept of HMM logos. The method illustrates the similarities of pairs of protein family profiles in an intuitive way. Two HMM logos, one for each profile, are drawn one upon the other. The aligned states are then highlighted and connected. AVAILABILITY: A web interface offering online cre...

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Journal:
Bioinformatics (Oxford, England)
Volume:
21
Issue:
12
Pages:
2912-2913
Publication date:
2005-06-01
DOI:
EISSN:
1367-4811
ISSN:
1367-4803
Language:
English
Keywords:
Pubs id:
pubs:410270
UUID:
uuid:a7511e2e-7c6d-4513-8751-cbc36613d316
Local pid:
pubs:410270
Source identifiers:
410270
Deposit date:
2013-11-16

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