Antecedent effect models as an exploratory tool to link climate drivers to herbaceous perennial population dynamics data

Journal article

Understanding mechanisms and predicting natural population responses to climate is a key goal of Ecology. However, studies explicitly linking climate to population dynamics remain limited. Antecedent effect models are a set of statistical tools that capitalize on the evidence provided by climate and population data to select time windows correlated with a response (e.g., survival, reproduction). Thus, these models can serve as both a predictive and exploratory tool. We compare the predictive performance of antecedent effect models against simpler models and showcase their exploratory analysis potential by selecting a case study with high predictive power. We fit three antecedent effect models: (1) weighted mean models (WMM), which weigh the importance of monthly anomalies based on a Gaussian curve, (2) stochastic antecedent models (SAM), which weigh the importance of monthly anomalies using a Dirichlet process, and (3) regularized regressions using the Finnish horseshoe model (FHM), which estimate a separate effect size for each monthly anomaly. We compare these approaches to a linear model using a yearly climatic predictor and a null model with no predictors. We use demographic data from 77 natural populations of 34 plant species ranging between seven and 36 years in length. We then fit models to the asymptotic population growth rate (<i>λ</i>) and its underlying vital rates: survival, development, and reproduction. We find that models including climate do not consistently outperform null models. We hypothesize that the effect of yearly climate is too complex, weak, and confounded by other factors to be easily predicted using monthly precipitation and temperature data. On the other hand, in our case study, antecedent effect models show biologically sensible correlations between two precipitation anomalies and multiple vital rates. We conclude that, in temporal datasets with limited sample sizes, antecedent effect models are better suited as exploratory tools for hypothesis generation.

Authors: Compagnoni, A; Childs, D; Knight, TM; Salguero-Gomez, R

• Publication status: Published
• Peer review status: Peer reviewed
• Publisher: Wiley
• Journal: Ecology and Evolution
• Volume: 14
• Issue: 10
• Article number: e70484
• Place of publication: England
• Publication date: 2024-10-29
• Acceptance date: 2024-08-14
• DOI: 10.1002/ece3.70484
• EISSN: 2045-7758
• Pmid: 39474477
• Language: English
• Keywords: COMPADRE Plant Matrix Database; vital rate; environmental drivers; cross‐validation; Bayesian moving window; population growth rate; forecasting; regularization; lagged climate effect