Journal article
Ankylosing spondylitis is associated with the anthrax toxin receptor 2 gene (ANTXR2).
- Abstract:
- OBJECTIVES: ANTXR2 variants have been associated with ankylosing spondylitis (AS) in two previous genome-wide association studies (GWAS) (p∼9×10(-8)). However, a genome-wide significant association (p<5×10(-8)) was not observed. We conducted a more comprehensive analysis of ANTXR2 in an independent UK sample to confirm and refine this association. METHODS: A replication study was carried out with 2978 cases and 8365 controls. Then, these were combined with non-overlapping samples from the two previous GWAS in a meta-analysis. Human leukocyte antigen (HLA)-B27 stratification was also performed to test for ANTXR2-HLA-B27 interaction. RESULTS: Out of nine single nucleotide polymorphisms (SNP) in the study, five SNPs were nominally associated (p<0.05) with AS in the replication dataset. In the meta-analysis, eight SNPs showed evidence of association, the strongest being with rs12504282 (OR=0.88, p=6.7×10(-9)). Seven of these SNPs showed evidence for association in the HLA-B27-positive subgroup, but none was associated with HLA-B27-negative AS. However, no statistically significant interaction was detected between HLA-B27 and ANTXR2 variants. CONCLUSIONS: ANTXR2 variants are clearly associated with AS. The top SNPs from two previous GWAS (rs4333130 and rs4389526) and this study (rs12504282) are in strong linkage disequilibrium (r(2)≥0.76). All are located near a putative regulatory region. Further studies are required to clarify the role played by these ANTXR2 variants in AS.
- Publication status:
- Published
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Authors
- Publisher:
- BMJ Publishing Group
- Journal:
- Annals of the rheumatic diseases More from this journal
- Volume:
- 73
- Issue:
- 11
- Pages:
- 2054-2058
- Publication date:
- 2014-11-01
- DOI:
- EISSN:
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1468-2060
- ISSN:
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0003-4967
- Language:
-
English
- Keywords:
- Pubs id:
-
pubs:482533
- UUID:
-
uuid:a0a4efd0-8a37-48b4-b2da-cbd834b44944
- Local pid:
-
pubs:482533
- Source identifiers:
-
482533
- Deposit date:
-
2014-09-14
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- Copyright date:
- 2014
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