Journal article
The Quest for Orthologs orthology benchmark service in 2022
- Abstract:
- The Orthology Benchmark Service (https://orthology.benchmarkservice.org) is the gold standard for orthology inference evaluation, supported and maintained by the Quest for Orthologs consortium. It is an essential resource to compare existing and new methods of orthology inference (the bedrock for many comparative genomics and phylogenetic analysis) over a standard dataset and through common procedures. The Quest for Orthologs Consortium is dedicated to maintaining the resource up to date, through regular updates of the Reference Proteomes and increasingly accessible data through the OpenEBench platform. For this update, we have added a new benchmark based on curated orthology assertion from the Vertebrate Gene Nomenclature Committee, and provided an example meta-analysis of the public predictions present on the platform.
- Publication status:
- Published
- Peer review status:
- Peer reviewed
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(Preview, Version of record, pdf, 1.3MB, Terms of use)
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(Preview, Other, pdf, 82.4KB, Terms of use)
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- Publisher copy:
- 10.1093/nar/gkac330
Authors
+ U.S. National Science Foundation
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- Funder identifier:
- https://ror.org/021nxhr62
+ Japan Science and Technology Agency
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- Funder identifier:
- https://ror.org/00097mb19
+ Ministry of Education, Culture, Sports, Science and Technology
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- Funder identifier:
- https://ror.org/048rj2z13
+ Swiss National Science Foundation
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- Funder identifier:
- https://ror.org/00yjd3n13
- Publisher:
- Oxford University Press
- Journal:
- Nucleic Acids Research More from this journal
- Volume:
- 50
- Issue:
- W1
- Pages:
- W623-W632
- Publication date:
- 2022-05-12
- Acceptance date:
- 2022-04-30
- DOI:
- EISSN:
-
1362-4962
- ISSN:
-
0305-1048
- Language:
-
English
- Pubs id:
-
1260096
- Local pid:
-
pubs:1260096
- Source identifiers:
-
2574806
- Deposit date:
-
2025-01-09
- ARK identifier:
This ORA record was generated from metadata provided by an external service. It has not been edited by the ORA Team.
Terms of use
- Copyright date:
- 2022
- Licence:
- CC Attribution (CC BY)
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