Journal article
Lateral transfer in Stochastic Dollo models
- Abstract:
-
Lateral transfer, a process whereby species exchange evolutionary traits through non-ancestral relationships, is a frequent source of model misspecification in phylogenetic inference. Lateral transfer obscures the phylogenetic signal in the data as the histories of affected traits are mosaics of the overall phylogeny. We control for the effect of lateral transfer in a Stochastic Dollo model and a Bayesian setting. Our likelihood is highly intractable as the parameters are the solution of a se...
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- Publication status:
- Published
- Peer review status:
- Peer reviewed
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Authors
Funding
+ Engineering and Physical Sciences
Research Council
More from this funder
Funding agency for:
Kelly, L
Grant:
EP/J500495/1
Bibliographic Details
- Publisher:
- Institute of Mathematical Statistics Publisher's website
- Journal:
- Annals of Applied Statistics Journal website
- Volume:
- 11
- Issue:
- 2
- Pages:
- 1146-1168
- Publication date:
- 2017-07-20
- Acceptance date:
- 2017-03-02
- DOI:
- EISSN:
-
1941-7330
- ISSN:
-
1932-6157
Item Description
- Keywords:
- Pubs id:
-
pubs:684079
- UUID:
-
uuid:893a8c1d-a098-489f-bae1-9b0023928266
- Local pid:
- pubs:684079
- Source identifiers:
-
684079
- Deposit date:
- 2017-03-06
Terms of use
- Copyright holder:
- Institute of Mathematical Statistics
- Copyright date:
- 2017
- Notes:
- Copyright © 2017 Institute of Mathematical Statistics.
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