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Journal article

COVID-19 transmission dynamics underlying epidemic waves in Kenya

Abstract:
Policy decisions on COVID-19 interventions should be informed by a local, regional and national understanding of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) transmission. Epidemic waves may result when restrictions are lifted or poorly adhered to, variants with new phenotypic properties successfully invade, or infection spreads to susceptible subpopulations. Three COVID-19 epidemic waves have been observed in Kenya. Using a mechanistic mathematical model, we explain the first two distinct waves by differences in contact rates in high and low social-economic groups, and the third wave by the introduction of higher-transmissibility variants. Reopening schools led to a minor increase in transmission between the second and third waves. Socioeconomic and urban–rural population structure are critical determinants of viral transmission in Kenya.
Publication status:
Published
Peer review status:
Peer reviewed

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Publisher copy:
10.1126/science.abk0414

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Role:
Author
ORCID:
0000-0003-0645-5367
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Role:
Author
ORCID:
0000-0002-3010-1158
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Role:
Author
ORCID:
0000-0003-3461-2622
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Role:
Author
ORCID:
0000-0002-3554-795X
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Institution:
University of Oxford
Department:
External
Role:
Author
ORCID:
0000-0001-9543-8360


Publisher:
American Association for the Advancement of Science
Journal:
Science More from this journal
Volume:
374
Issue:
6570
Pages:
989-994
Publication date:
2021-11-01
Acceptance date:
2021-10-04
DOI:
EISSN:
1095-9203
ISSN:
0036-8075
Pmid:
34618602


Language:
English
Keywords:
Pubs id:
1200156
Local pid:
pubs:1200156
Deposit date:
2022-03-16
ARK identifier:

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