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Evolution of complex RNA polymerases: the complete archaeal RNA polymerase structure

Abstract:
The archaeal RNA polymerase (RNAP) shares structural similarities with eukaryotic RNAP II but requires a reduced subset of general transcription factors for promoter-dependent initiation. To deepen our knowledge of cellular transcription, we have determined the structure of the 13-subunit DNA-directed RNAP from Sulfolobus shibatae at 3.35 Å resolution. The structure contains the full complement of subunits, including RpoG/Rpb8 and the equivalent of the clamp-head and jaw domains of the eukaryotic Rpb1. Furthermore, we have identified subunit Rpo13, an RNAP component in the order Sulfolobales, which contains a helix-turn-helix motif that interacts with the RpoH/Rpb5 and RpoA'/Rpb1 subunits. Its location and topology suggest a role in the formation of the transcription bubble.
Publication status:
Published
Peer review status:
Peer reviewed

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Publisher copy:
10.1371/journal.pbio.1000102

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Institution:
Harvard Medical School, Boston, USA
Department:
Howard Hughes Medical Institute
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Author
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Institution:
Howard Hughes Medical Institute, Harvard University, USA
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Author
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Institution:
Yale University, USA
Department:
Howard Hughes Medical Institute
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Author
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Institution:
Harvard Medical School, Boston, USA
Department:
Howard Hughes Medical Institute
Role:
Author
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Institution:
University of Oxford
Department:
Oxford Protein Production Facility
Role:
Author

Contributors

Institution:
Vanderbilt University, USA
Role:
Editor



Publisher:
Public Library of Science
Journal:
PLoS Biology More from this journal
Volume:
7
Issue:
5
Article number:
e1000102
Publication date:
2009-05-01
Edition:
Publisher's version
DOI:
EISSN:
1545-7885
ISSN:
1544-9173


Language:
English
Keywords:
Subjects:
UUID:
uuid:526dfd47-90c0-4279-a961-04a573f0e71d
Local pid:
ora:2807
Deposit date:
2009-06-04

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