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Journal article

Genomic and epidemiological monitoring of yellow fever virus transmission potential

Abstract:
The yellow fever virus (YFV) epidemic in Brazil is the largest in decades. The recent discovery of YFV in Brazilian Aedes species mosquitos highlights a need to monitor the risk of reestablishment of urban YFV transmission in the Americas. We use a suite of epidemiological, spatial, and genomic approaches to characterize YFV transmission. We show that the age and sex distribution of human cases is characteristic of sylvatic transmission. Analysis of YFV cases combined with genomes generated locally reveals an early phase of sylvatic YFV transmission and spatial expansion toward previously YFV-free areas, followed by a rise in viral spillover to humans in late 2016. Our results establish a framework for monitoring YFV transmission in real time that will contribute to a global strategy to eliminate future YFV epidemics.
Publication status:
Published
Peer review status:
Peer reviewed

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Publisher copy:
10.1126/science.aat7115

Authors

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Institution:
University of Oxford
Division:
MPLS Division
Department:
Zoology
Role:
Author
ORCID:
0000-0001-8839-2798
More by this author
Institution:
University of Oxford
Division:
MPLS Division
Department:
Zoology
Role:
Author
ORCID:
0000-0001-8838-7147
More by this author
Institution:
University of Oxford
Division:
MPLS Division
Department:
Zoology
Role:
Author
ORCID:
0000-0002-2995-2596
More by this author
Role:
Author
ORCID:
0000-0002-5404-272X
More by this author
Role:
Author
ORCID:
0000-0001-5180-3717


More from this funder
Funding agency for:
Kraemer, MUG
Grant:
R01LM011965
More from this funder
Funding agency for:
Kraemer, MUG
Grant:
R01LM011965
More from this funder
Funding agency for:
Faria, NR
Grant:
005166
More from this funder
Funding agency for:
Faria, NR
Grant:
005166


Publisher:
American Association for the Advancement of Science
Journal:
Science More from this journal
Volume:
361
Issue:
6405
Pages:
894-899
Publication date:
2018-08-31
Acceptance date:
2018-07-20
DOI:
EISSN:
1095-9203
ISSN:
0036-8075
Pmid:
30139911


Language:
English
Keywords:
Pubs id:
pubs:911055
UUID:
uuid:4d6b67ea-d540-450f-a8c0-a6c4f2e65ace
Local pid:
pubs:911055
Source identifiers:
911055
Deposit date:
2018-09-26
ARK identifier:

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