Journal article

ALARUM: Active One Health surveillance in LMICs to monitor and predict Antimicrobial Resistance Using Metagenomics – a cross-sectional study protocol

Abstract:: Background In rural sub-Saharan Africa (sSA), the burden of antimicrobial resistance (AMR) remains high. As AMR continues to rise, there is a strong need for practical, implementable surveillance to monitor and mitigate risks, as well as inform timely, evidence-based clinical decision-making. Emerging evidence points to possible community-level drivers, such as transmission between human, animal and environmental reservoirs as co...
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Publication status:: Published

Peer review status:: Peer reviewed

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APA Style

van der Sande, M. A. B., Valia, D., Tigoi, C., Stoesser, N., Stamm, L., Marten, A., Riems, B., Musyimi, R., Sibidou, Y., Schurch, A. C., Tiendrebeogo, E. W., Mwaringa, S., Kohns Vasconcelos, M., Ingelbeen, B., Tinto, H., Bielicki, J. A., Cooper, B. S., Berkley, J. A., & van Kleef, E. (2026). ALARUM: Active One Health surveillance in LMICs to monitor and predict Antimicrobial Resistance Using Metagenomics – a cross-sectional study protocol. BMJ Open, 16(2), e107465–e107465.

MLA Style

van der Sande, MAB, et al. “ALARUM: Active One Health Surveillance in LMICs to Monitor and Predict Antimicrobial Resistance Using Metagenomics – a Cross-Sectional Study Protocol.” BMJ Open, vol. 16, no. 2, 2026, pp. e107465–e107465.

Chicago Style

Sande, MAB van der, D Valia, C Tigoi, et al. 2026. “ALARUM: Active One Health Surveillance in LMICs to Monitor and Predict Antimicrobial Resistance Using Metagenomics – a Cross-Sectional Study Protocol.” BMJ Open 16 (2): e107465–e107465.
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Files:: van_der_Sande_et_al_2026_ALARUM_Active_One.pdf

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Publisher copy:: 10.1136/bmjopen-2025-107465

Authors

+ van der Sande, MAB More by this author

Role:: Author
ORCID:: 0000-0002-4778-6739

+ Valia, D More by this author

Role:: Author

+ Tigoi, C More by this author

Role:: Author
ORCID:: 0000-0003-2750-7533

+ Stoesser, N More by this author

Institution:: University of Oxford
Role:: Author

+ Stamm, L More by this author

Role:: Author

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Publisher:: BMJ Publishing Group
Journal:: BMJ Open More from this journal
Volume:: 16
Issue:: 2
Pages:: e107465-e107465
Publication date:: 2026-02-24
Acceptance date:: 2026-01-20
DOI:: 10.1136/bmjopen-2025-107465
EISSN:: 2044-6055
ISSN:: 2044-6055

Language:: English
Keywords:: Health surveillance

Metagenomics

Epidemiological surveillance

General partnership

Public health

Public health surveillance

Protocol (science)

Antibiotic resistance
Pubs id:: 2381594
Local pid:: pubs:2381594
Source identifiers:: W7131226669
Deposit date:: 2026-02-26
ARK identifier:: ark:/29072/ora_3d81f5f40133429ca3099ca5a9415922

Terms of use

Copyright date:: 2026

Licence:: CC Attribution (CC BY)

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