Journal article icon

Journal article

iSEE: Interactive SummarizedExperiment Explorer

Abstract:

Data exploration is critical to the comprehension of large biological data sets generated by high-throughput assays such as sequencing. However, most existing tools for interactive visualisation are limited to specific assays or analyses. Here, we present the iSEE (Interactive SummarizedExperiment Explorer) software package, which provides a general visual interface for exploring data in a SummarizedExperiment object. iSEE is directly compatible with many existing R/Bioconductor packages for ...

Expand abstract
Publication status:
Published
Peer review status:
Peer reviewed
Version:
Publisher's Version

Actions


Access Document


Files:
Publisher copy:
10.12688/f1000research.14966.1

Authors


More by this author
Institution:
University of Oxford
Division:
Medical Sciences Division
Department:
NDORMS
Subgroup:
KIR
Role:
Author
ORCID:
0000-0003-3899-3872
More by this author
Role:
Author
ORCID:
0000-0003-3252-7758
Publisher:
F1000Research Publisher's website
Journal:
F1000Research Journal website
Volume:
7
Pages:
Article: 741
Publication date:
2018-06-14
Acceptance date:
2018-06-14
DOI:
EISSN:
2046-1402
ISSN:
2046-1402
Pubs id:
pubs:880144
URN:
uri:2d467547-0991-4c9f-98f0-e36123a19070
UUID:
uuid:2d467547-0991-4c9f-98f0-e36123a19070
Local pid:
pubs:880144

Terms of use


Metrics


Views and Downloads






If you are the owner of this record, you can report an update to it here: Report update to this record

TO TOP