Journal article

Rahnuma: hypergraph-based tool for metabolic pathway prediction and network comparison.

Abstract:: SUMMARY: We present a tool called Rahnuma for prediction and analysis of metabolic pathways and comparison of metabolic networks. Rahnuma represents metabolic networks as hypergraphs and computes all possible pathways between two or more metabolites. It provides an intuitive way to answer biological ques- tions focusing on differences between organisms or the evolution of different species by allowing pathway-based metabolic network comparisons at an organism as well as at a phylogenetic level. AVAILABILITY: Rahnuma is available online at http://portal.stats.ox.ac.uk:8080/rahnuma/.

Publication status:: Published

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APA Style

Mithani, A., Preston, G., & Hein, J. (2009). Rahnuma: hypergraph-based tool for metabolic pathway prediction and network comparison. Bioinformatics (Oxford, England), 25(14), 1831–1832.

MLA Style

Mithani, A, et al. “Rahnuma: Hypergraph-Based Tool for Metabolic Pathway Prediction and Network Comparison.” Bioinformatics (Oxford, England), vol. 25, no. 14, 2009, pp. 1831–32.

Chicago Style

Mithani, A, G Preston, and J Hein. 2009. “Rahnuma: Hypergraph-Based Tool for Metabolic Pathway Prediction and Network Comparison.” Bioinformatics (Oxford, England) 25 (14): 1831–32.
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Publisher copy:: 10.1093/bioinformatics/btp269

Authors

+ Mithani, A More by this author

Role:: Author

+ Preston, G More by this author

Institution:: University of Oxford
Division:: MPLS
Department:: Plant Sciences
Role:: Author

+ Hein, J More by this author

Role:: Author

Journal:: Bioinformatics (Oxford, England) More from this journal
Volume:: 25
Issue:: 14
Pages:: 1831-1832
Publication date:: 2009-07-01
DOI:: 10.1093/bioinformatics/btp269
EISSN:: 1367-4811
ISSN:: 1367-4803

Language:: English
Keywords:: Software

Computational Biology

Metabolic Networks and Pathways

Phylogeny
Pubs id:: pubs:34700
UUID:: uuid:11a387cf-a623-4c2a-8891-6fe7d53ef7e0
Local pid:: pubs:34700
Source identifiers:: 34700
Deposit date:: 2012-12-19
ARK identifier:: ark:/29072/ora_11a387cfa6234c2a88916fe7d53ef7e0

Terms of use

Copyright date:: 2009

Licence:: Terms and Conditions of Use for Oxford University Research Archive

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