Journal article icon

Journal article

BugMat and FindNeighbour: command line and server applications for investigating bacterial relatedness.

Abstract:

Background

Large scale bacterial sequencing has made the determination of genetic relationships within large sequence collections of bacterial genomes derived from the same microbial species an increasingly common task. Solutions to the problem have application to public health (for example, in the detection of possible disease transmission), and as part of divide-and-conquer strategies selecting groups of similar isolates for computationally intensive methods of phylogenetic inf...

Expand abstract
Publication status:
Published
Peer review status:
Peer reviewed

Actions


Access Document


Authors


More by this author
Institution:
University of Oxford
Division:
MPLS Division
Department:
Computer Science
Role:
Author
More by this author
Institution:
University of Oxford
Division:
Medical Sciences Division
Department:
NDM, NDM Experimental Medicine
Role:
Author
More by this author
Institution:
University of Oxford
Division:
Medical Sciences Division
Department:
NDM; NDM Experimental Medicine; Biomedical Research Centre
Role:
Author
More by this author
Institution:
University of Oxford
Division:
Medical Sciences Division
Department:
NDM; NDM Experimental Medicine
Role:
Author
More from this funder
Name:
Medical Research Council
Grant:
G0800778
More from this funder
Name:
National Institute for Health Research
Grant:
G0800778
More from this funder
Name:
Biotechnology and Biological Sciences Research Council
Grant:
G0800778
More from this funder
Name:
Public Health England
Grant:
HPRU-2012-10,041
Publisher:
BioMed Central
Journal:
BMC Bioinformatics More from this journal
Volume:
18
Issue:
1
Pages:
477
Publication date:
2017-11-01
Acceptance date:
2017-11-01
DOI:
EISSN:
1471-2105
ISSN:
1471-2105
Pmid:
29132318
Language:
English
Keywords:
Pubs id:
pubs:745968
UUID:
uuid:f1e0ee63-e446-423b-b67e-7fd1ad340c9e
Local pid:
pubs:745968
Source identifiers:
745968
Deposit date:
2017-12-19

Terms of use


Views and Downloads






If you are the owner of this record, you can report an update to it here: Report update to this record

TO TOP