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Journal article

PairsDB atlas of protein sequence space

Abstract:

Sequence similarity/database searching is a cornerstone of molecular biology. PairsDB is a database intended to make exploring protein sequences and their similarity relationships quick and easy. Behind PairsDB is a comprehensive collection of protein sequences and BLAST and PSI-BLAST alignments between them. Instead of running BLAST or PSI-BLAST individually on each request, results are retrieved instantaneously from a database of pre-computed alignments. Filtering options allow you to find ...

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Publisher copy:
10.1093/nar/gkm879

Authors


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Institution:
University of Oxford
Department:
Oxford, MSD, Physiology Anatomy and Genetics
Korpelainen, E More by this author
Hupponen, T More by this author
Mattila, K More by this author
Ollikainen, V More by this author
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Journal:
Nucleic Acids Research
Volume:
36
Issue:
SUPPL. 1
Publication date:
2008-01-05
DOI:
EISSN:
1362-4962
ISSN:
0305-1048
URN:
uuid:deac0889-21a4-4928-9729-b71c342566c9
Source identifiers:
238818
Local pid:
pubs:238818
Language:
English

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