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The Quest for Orthologs benchmark service and consensus calls in 2020

Abstract:

The identification of orthologs-genes in different species which descended from the same gene in their last common ancestor-is a prerequisite for many analyses in comparative genomics and molecular evolution. Numerous algorithms and resources have been conceived to address this problem, but benchmarking and interpreting them is fraught with difficulties (need to compare them on a common input dataset, absence of ground truth, computational cost of calling orthologs). To address this, the Ques...

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Publication status:
Published
Peer review status:
Peer reviewed

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Role:
Author
ORCID:
0000-0001-7492-1273
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Role:
Author
ORCID:
0000-0002-1066-8659
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Institution:
University of Oxford
Department:
PLANT SCIENCES
Sub department:
Plant Sciences
Role:
Author
ORCID:
0000-0002-9065-8978
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Name:
Royal Society
Grant:
UF140484
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Name:
European Commission
Grant:
637765
Publisher:
Oxford University Press
Journal:
Nucleic Acids Research More from this journal
Volume:
48
Issue:
W1
Pages:
W538-W545
Publication date:
2020-05-06
Acceptance date:
2020-04-20
DOI:
EISSN:
1362-4962
Pmid:
32374845
Language:
English
Keywords:
Pubs id:
1103367
Local pid:
pubs:1103367
Deposit date:
2020-10-06

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