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Mapping the drivers of within-host pathogen evolution using massive data sets

Abstract:

Differences among hosts, resulting from genetic variation in the immune system or heterogeneity in drug treatment, can impact within-host pathogen evolution. Genetic association studies can potentially identify such interactions. However, extensive and correlated genetic population structure in hosts and pathogens presents a substantial risk of confounding analyses. Moreover, the multiple testing burden of interaction scanning can potentially limit power. We present a Bayesian approach for de...

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Publication status:
Published
Peer review status:
Peer reviewed

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Publisher copy:
10.1038/s41467-019-10724-w

Authors


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Institution:
University of Oxford
Division:
Medical Sciences Division
Department:
NDM
Sub department:
NDM Experimental Medicine
Role:
Author
Publisher:
Springer Nature
Journal:
Nature Communications More from this journal
Volume:
10
Article number:
3017
Publication date:
2019-07-09
Acceptance date:
2019-05-20
DOI:
EISSN:
2041-1723
Pubs id:
pubs:1011980
UUID:
uuid:c29d3020-c9e4-4410-9582-1ee2c314faaf
Local pid:
pubs:1011980
Source identifiers:
1011980
Deposit date:
2019-06-12

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