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Computational methods for generating models of denatured and partially folded proteins.

Abstract:

Partially folded and denatured proteins can give important insights into protein folding, misfolding, and aggregation. Such non-native states of proteins are however very difficult to characterise in detail as they are dynamic, heterogeneous systems comprising of ensembles of interconverting conformers. This article describes methods that produce models for non-native proteins in atomic detail. A variety of molecular dynamics based protocols are discussed together with some recent procedures ...

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Publication status:
Published

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Publisher copy:
10.1016/j.ymeth.2004.03.011

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Institution:
University of Oxford
Department:
Oxford, MPLS, Chemistry, Inorganic Chemistry
Journal:
Methods (San Diego, Calif.)
Volume:
34
Issue:
1
Pages:
144-150
Publication date:
2004-09-05
DOI:
EISSN:
1095-9130
ISSN:
1046-2023
URN:
uuid:a9cc39ba-31da-43a4-aada-6dd9eea509e8
Source identifiers:
32804
Local pid:
pubs:32804

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