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Journal article

Jointly inferring the dynamics of population size and sampling intensity from molecular sequences

Abstract:

Estimating past population dynamics from molecular sequences that have been sampled longitudinally through time is an important problem in infectious disease epidemiology, molecular ecology and macroevolution. Popular solutions, such as the skyline and skygrid methods, infer past effective population sizes from the coalescent event times of phylogenies reconstructed from sampled sequences, but assume that sequence sampling times are uninformative about population size changes. Recent work has...

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Publication status:
Published
Peer review status:
Peer reviewed

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Publisher copy:
10.1093/molbev/msaa016

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Department:
ZOOLOGY
Sub department:
Zoology
Oxford college:
Linacre College
Role:
Author
ORCID:
0000-0002-8797-2667
Publisher:
Oxford University Press Publisher's website
Journal:
Molecular Biology and Evolution Journal website
Volume:
37
Issue:
8
Pages:
2414–2429
Publication date:
2020-01-31
Acceptance date:
2020-01-07
DOI:
EISSN:
1537-1719
Language:
English
Keywords:
Pubs id:
1084347
Local pid:
pubs:1084347
Deposit date:
2020-02-03

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