- Abstract:
-
Normalized spectral index quantification was recently presented as an accurate method of label-free quantitation, which improved spectral counting by incorporating the intensities of peptide MS/MS fragment ions into the calculation of protein abundance. We present SINQ, a tool implementing this method within the framework of existing analysis software, our freely available central proteomics facilities pipeline (CPFP). We demonstrate, using data sets of protein standards acquired on a variety...
Expand abstract - Publication status:
- Published
- Publisher copy:
- 10.1002/pmic.201000800
-
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- Journal:
- Proteomics
- Volume:
- 11
- Issue:
- 14
- Pages:
- 2790-2797
- Publication date:
- 2011-07-05
- DOI:
- EISSN:
-
1615-9861
- ISSN:
-
1615-9853
- URN:
-
uuid:a940dc21-ad0d-4d9c-912c-3b927d78593d
- Source identifiers:
-
151227
- Local pid:
- pubs:151227
- Language:
- English
- Keywords:
- Copyright date:
- 2011
Journal article
Comparative evaluation of label-free SINQ normalized spectral index quantitation in the central proteomics facilities pipeline.
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