CellML 2.0 - ORA - Oxford University Research Archive

Abstract:: We present here CellML 2.0, an XML-based language for describing and exchanging mathematical models of physiological systems. MathML embedded in CellML documents is used to define the underlying mathematics of models. Models consist of a network of reusable components, each with variables and equations giving relationships between those variables. Models may import other models to create systems of increasing complexity. CellML 2.0 is defined by the normative specification presented here, prescribing the CellML syntax and the rules by which it should be used. The normative specification is intended primarily for the developers of software tools which directly consume CellML syntax. Users of CellML models may prefer to browse the informative rendering of the specification (https://cellml.org/specifications/cellml_2.0/) which extends the normative specification with explanations of the rules combined with examples of their usage.

Publication status:: Published

Peer review status:: Peer reviewed

Actions

Email

Email this record

Send the bibliographic details of this record to your email address.

Your Email
Please enter the email address that the record information will be sent to.

-
Your message (optional)
Please add any additional information to be included within the email.
Cite

Cite this record

APA Style

Clerx, M., Cooling, M., Cooper, J., Garny, A., Moyle, K., Nickerson, D., Nielsen, P., & Sorby, H. (2020). CellML 2.0. Journal of Integrative Bioinformatics, 17(2-3).

MLA Style

Clerx, M., et al. “CellML 2.0.” Journal of Integrative Bioinformatics, vol. 17, no. 2-3, De Gruyter Open, 2020.

Chicago Style

Clerx, M, M Cooling, J Cooper, A Garny, K Moyle, D Nickerson, P Nielsen, and H Sorby. 2020. “CellML 2.0.” Journal of Integrative Bioinformatics 17 (2-3).
Share
Print

Access Document

Files:: Clerx_et_al_2020_cellml_20.pdf

(Preview, Version of record, 280.7KB, Terms of use)

Publisher copy:: 10.1515/jib-2020-0021

Authors

+ Clerx, M More by this author

Institution:: University of Oxford
Division:: MPLS
Department:: Computer Science
Role:: Author
ORCID:: 0000-0003-4062-3061

+ Cooling, M More by this author

Role:: Author

+ Cooper, J More by this author

Role:: Author

+ Garny, A More by this author

Role:: Author

+ Moyle, K More by this author

Role:: Author

More authors...

+ Biotechnology and Biological Sciences Research Council More from this funder

Funder identifier:: http://dx.doi.org/10.13039/501100000268
Grant:: BB/P010008/1

Publisher:: De Gruyter Open
Journal:: Journal of Integrative Bioinformatics More from this journal
Volume:: 17
Issue:: 2-3
Article number:: 20200021
Publication date:: 2020-07-24
Acceptance date:: 2020-04-20
DOI:: 10.1515/jib-2020-0021
EISSN:: 1613-4516

Language:: English
Keywords:: FFR
Pubs id:: 1106583
Local pid:: pubs:1106583
Deposit date:: 2020-05-25

Terms of use

Copyright holder:: Clerx et al.
Copyright date:: 2020
Rights statement:: © 2020 Michael Clerx et al., published by De Gruyter. This work is licensed under the Creative Commons Attribution 4.0 International License.

Licence:: CC Attribution (CC BY)

Views and Downloads

About views and downloads

If you are the owner of this record, you can report an update to it here: Report update to this record

TO TOP