Report icon

Report

Finding transcription factor binding sites in DNA Sequences: A template based approach

Abstract:

A problem faced by many algorithms for finding transcription factor binding sites is the high number of false positive hits that result with the increased sensitivity of their prediction. A main contributing factor to this is the short and degenerate nature of these sites which results in a low signal to noise ratio. In order to counter this problem one needs to look beyond the base independence assumption. We propose a model based on templates designed to capture not only the vertical consen...

Expand abstract

Actions


Authors


Publisher:
Oxford University Computing Laboratory
Publication date:
2003-10-01
URN:
uuid:9e5b6995-db16-4b47-a103-cf390312fd99
Local pid:
cs:2572

Terms of use


Metrics


Views and Downloads






If you are the owner of this record, you can report an update to it here: Report update to this record

TO TOP