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Journal article

Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads.

Abstract:

High-volume sequencing of DNA and RNA is now within reach of any research laboratory and is quickly becoming established as a key research tool. In many workflows, each of the short sequences ("reads") resulting from a sequencing run are first "mapped" (aligned) to a reference sequence to infer the read from which the genomic location derived, a challenging task because of the high data volumes and often large genomes. Existing read mapping software excel in either speed (e.g., BWA, Bowtie, E...

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Publication status:
Published

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Publisher copy:
10.1101/gr.111120.110

Authors


Journal:
Genome research
Volume:
21
Issue:
6
Pages:
936-939
Publication date:
2011-06-05
DOI:
EISSN:
1549-5469
ISSN:
1088-9051
URN:
uuid:881d7083-0c25-4aa7-a03c-764b21a723d3
Source identifiers:
90833
Local pid:
pubs:90833

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