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Journal article

Cross-species inference of long non-coding RNAs greatly expands the ruminant transcriptome

Abstract:

Background

mRNA-like long non-coding RNAs (lncRNAs) are a significant component of mammalian transcriptomes, although most are expressed only at low levels, with high tissue-specificity and/or at specific developmental stages. Thus, in many cases lncRNA detection by RNA-sequencing (RNA-seq) is compromised by stochastic sampling. To account for this and create a catalogue of ruminant lncRNAs, we compared de novo assembled lncRNAs derived from large RNA-seq datasets in transcriptio...

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Publication status:
Published
Peer review status:
Peer reviewed

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Institution:
University of Oxford
Division:
Medical Sciences Division
Department:
NDM; NDM Experimental Medicine
Role:
Author
ORCID:
0000-0001-9341-2562
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Name:
Medical Research Council
Grant:
MR/K001744/1
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Name:
Natural Environment Research Council
Grant:
R8/H10/56
More from this funder
Name:
Biotechnology and Biological Sciences Research Council
Grant:
BBS/E/D/20211552
Publisher:
BioMed Central
Journal:
Genetics Selection Evolution More from this journal
Volume:
50
Issue:
1
Pages:
20
Publication date:
2018-04-24
Acceptance date:
2018-04-13
DOI:
EISSN:
1297-9686
ISSN:
0999-193X
Pmid:
29690875
Language:
English
Keywords:
Pubs id:
pubs:846532
UUID:
uuid:6e404cdc-178a-4ff3-9720-c5a97d78c352
Local pid:
pubs:846532
Source identifiers:
846532
Deposit date:
2018-05-09

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