Journal article
Real-time analysis of nanopore-based metagenomic sequencing from infected orthopaedic devices
- Abstract:
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Background
Prosthetic joint infections are clinically difficult to diagnose and treat. Previously, we demonstrated metagenomic sequencing on an Illumina MiSeq replicates the findings of current gold standard microbiological diagnostic techniques. Nanopore sequencing offers advantages in speed of detection over MiSeq. Here, we report a real-time analytical pathway for Nanopore sequence data, designed for detecting bacterial composition of prosthetic joint infections but potentiall...
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- Publication status:
- Published
- Peer review status:
- Peer reviewed
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(Version of record, pdf, 1.6MB)
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- Publisher copy:
- 10.1186/s12864-018-5094-y
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Authors
Funding
Bibliographic Details
- Publisher:
- BioMed Central Publisher's website
- Journal:
- BMC Genomics Journal website
- Volume:
- 19
- Issue:
- 1
- Pages:
- 714
- Publication date:
- 2018-09-27
- Acceptance date:
- 2018-09-19
- DOI:
- EISSN:
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1471-2164
- ISSN:
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1471-2164
- Pmid:
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30261842
- Source identifiers:
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922568
Item Description
- Language:
- English
- Keywords:
- Pubs id:
-
pubs:922568
- UUID:
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uuid:6b580903-3e72-4d8a-b0a8-2dcc825ccf3e
- Local pid:
- pubs:922568
- Deposit date:
- 2018-12-06
Terms of use
- Copyright holder:
- Sanderson et al
- Copyright date:
- 2018
- Notes:
-
© The Author(s). 2018 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0
International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and
reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to
the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver
(http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
- Licence:
- CC Attribution (CC BY)
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