Journal article
Benchmarking orthogroup inference accuracy: revisiting Orthobench
- Abstract:
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Orthobench is the standard benchmark to assess the accuracy of orthogroup inference methods. It contains 70 expert-curated reference orthogroups (RefOGs) that span the Bilateria and cover a range of different challenges for orthogroup inference. Here, we leveraged improvements in tree inference algorithms and computational resources to reinterrogate these RefOGs and carry out an extensive phylogenetic delineation of their composition. This phylogenetic revision altered the membership of 31 of...
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- Publication status:
- Published
- Peer review status:
- Peer reviewed
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- Files:
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(Version of record, 564.3KB)
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(Supplementary materials, 812.2KB)
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- Publisher copy:
- 10.1093/gbe/evaa211
Authors
Bibliographic Details
- Publisher:
- Oxford University Press Publisher's website
- Journal:
- Genome Biology and Evolution Journal website
- Volume:
- 12
- Issue:
- 12
- Pages:
- 2258–2266
- Publication date:
- 2020-10-06
- Acceptance date:
- 2020-09-29
- DOI:
- EISSN:
-
1759-6653
Item Description
- Language:
- English
- Keywords:
- Pubs id:
-
1119375
- Local pid:
- pubs:1119375
- Deposit date:
- 2020-10-06
Terms of use
- Copyright holder:
- Emms, DM and Kelly, S
- Copyright date:
- 2020
- Rights statement:
- © The Author(s) 2020. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
- Licence:
- CC Attribution (CC BY)
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