Journal article icon

Journal article

Reticular alignment: a progressive corner-cutting method for multiple sequence alignment.

Abstract:

BACKGROUND: In this paper, we introduce a progressive corner cutting method called Reticular Alignment for multiple sequence alignment. Unlike previous corner-cutting methods, our approach does not define a compact part of the dynamic programming table. Instead, it defines a set of optimal and suboptimal alignments at each step during the progressive alignment. The set of alignments are represented with a network to store them and use them during the progressive alignment in an efficient way...

Expand abstract
Publication status:
Published
Peer review status:
Peer reviewed
Version:
Publisher's version

Actions


Access Document


Files:
Publisher copy:
10.1186/1471-2105-11-570

Authors


More by this author
Institution:
University of Oxford
Department:
Oxford, MPLS, Statistics
Miklós, I More by this author
More by this author
Institution:
University of Oxford
Department:
Oxford, MPLS, Statistics
Publisher:
BioMed Central Ltd. Publisher's website
Journal:
BMC bioinformatics Journal website
Volume:
11
Issue:
1
Pages:
570
Publication date:
2010-11-23
DOI:
EISSN:
1471-2105
ISSN:
1471-2105
URN:
uuid:6696b27d-cfed-4d06-a767-47e925be6376
Source identifiers:
102901
Local pid:
pubs:102901

Terms of use


Metrics



If you are the owner of this record, you can report an update to it here: Report update to this record

TO TOP