Journal article
A genome-wide view of transcription factor gene diversity in chordate evolution: less gene loss in amphioxus?
- Abstract:
-
Previous studies of gene diversity in the homeobox superclass have shown that the Florida amphioxus Branchiostoma floridae has undergone remarkably little gene family loss. Here we use a combined BLAST and HMM search strategy to assess the family level diversity of four other transcription factor superclasses: the Paired/Pax genes, Tbx genes, Fox genes and Sox genes. We apply this across genomes from five chordate taxa, including B. floridae and Ciona intestinalis, plus two outgroup taxa. Our...
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- Publication status:
- Published
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- Publisher copy:
- 10.1093/bfgp/els012
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Bibliographic Details
- Journal:
- Briefings in functional genomics
- Volume:
- 11
- Issue:
- 2
- Pages:
- 177-186
- Publication date:
- 2012-03-05
- DOI:
- EISSN:
-
2041-2657
- ISSN:
-
2041-2649
- URN:
-
uuid:632002f9-50c5-4c6e-8261-edafeefa8409
- Source identifiers:
-
320391
- Local pid:
- pubs:320391
Item Description
- Language:
- English
- Keywords:
Terms of use
- Copyright date:
- 2012
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