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Journal article

Comparative analysis of core genome MLST and SNP typing within a European Salmonella serovar Enteritidis outbreak

Abstract:

Multi-country outbreaks of foodborne bacterial disease present challenges in their detection, tracking, and notification. As food is increasingly distributed across borders, such outbreaks are becoming more common. This increases the need for high-resolution, accessible, and replicable isolate typing schemes. Here we evaluate a core genome multilocus typing (cgMLST) scheme for the high-resolution reproducible typing of Salmonella enterica (S. enterica) isolates, by its application to a large ...

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Publication status:
Published
Peer review status:
Peer reviewed
Version:
Publisher's version

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Publisher copy:
10.1016/j.ijfoodmicro.2018.02.023

Authors


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Institution:
University of Oxford
Division:
MPLS Division
Department:
Zoology
Alikhan, NF More by this author
Dallmann, T More by this author
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National Institute for Health Research More from this funder
Publisher:
Elsevier Publisher's website
Journal:
International Journal of Food Microbiology Journal website
Volume:
274
Pages:
1-11
Publication date:
2018-02-28
Acceptance date:
2018-02-27
DOI:
EISSN:
1879-3460
ISSN:
0168-1605
Pubs id:
pubs:831705
URN:
uri:427dc002-0426-40f4-a1a1-f748962bbf42
UUID:
uuid:427dc002-0426-40f4-a1a1-f748962bbf42
Local pid:
pubs:831705

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