Journal article
An algorithm for statistical alignment of sequences related by a binary tree.
- Abstract:
-
An algorithm is presented that allows the calculation of the probability of a set of sequences related by a binary tree that has evolved according to the Thorne-Kishino-Felsenstein model (1991) for a fixed set of parameters. There are two ideas underlying this algorithm. Firstly, a markov chain is defined that generates ancestral sequences and their alignment at two neighboring nodes in a tree. Secondly, a stochastic walk on the binary tree, that defines a markov chain generating ancestral se...
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Bibliographic Details
- Journal:
- Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing
- Pages:
- 179-190
- Publication date:
- 2001-01-01
- ISSN:
-
2335-6936
- Source identifiers:
-
102837
Item Description
- Language:
- English
- Keywords:
- Pubs id:
-
pubs:102837
- UUID:
-
uuid:427179d1-9279-4017-a32e-0cd78bac3826
- Local pid:
- pubs:102837
- Deposit date:
- 2013-02-20
Terms of use
- Copyright date:
- 2001
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