Journal article
Gibbs sampler for statistical multiple alignment
- Abstract:
- For a set of sequences, related by a binary tree, that have evolved according to the Thorne-Kishino-Felsenstein model, a Gibbs sampler is presented for simulating the ancestral sequences and their alignments. The updating step consists in updating the ancestral sequence and its three alignments within a 3-star tree. We compare the Gibbs sampler with the algorithm suggested recently by Holmes and Bruno.
- Publication status:
- Published
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Bibliographic Details
- Journal:
- STATISTICA SINICA
- Volume:
- 15
- Issue:
- 4
- Pages:
- 889-907
- Publication date:
- 2005-10-01
- ISSN:
-
1017-0405
- Source identifiers:
-
102906
Item Description
- Language:
- English
- Keywords:
- Pubs id:
-
pubs:102906
- UUID:
-
uuid:26e81e59-4cd6-459d-9e4e-f9abe04d136b
- Local pid:
- pubs:102906
- Deposit date:
- 2012-12-19
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- Copyright date:
- 2005
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