Journal article icon

Journal article

STOCHSIMGPU: parallel stochastic simulation for the Systems Biology Toolbox 2 for MATLAB.

Abstract:

MOTIVATION: The importance of stochasticity in biological systems is becoming increasingly recognized and the computational cost of biologically realistic stochastic simulations urgently requires development of efficient software. We present a new software tool STOCHSIMGPU that exploits graphics processing units (GPUs) for parallel stochastic simulations of biological/chemical reaction systems and show that significant gains in efficiency can be made. It is integrated into MATLAB and works w...

Expand abstract
Publication status:
Published

Actions


Access Document


Authors


Klingbeil, G More by this author
More by this author
Institution:
University of Oxford
Department:
Oxford, MPLS, Mathematical Inst
More by this author
Institution:
University of Oxford
Department:
Oxford, MPLS, Mathematical Inst
Journal:
Bioinformatics (Oxford, England)
Volume:
27
Issue:
8
Pages:
1170-1171
Publication date:
2011-04-05
DOI:
EISSN:
1367-4811
ISSN:
1367-4803
URN:
uuid:1facba04-3e15-4593-ba5c-2aa4b80585bd
Source identifiers:
120192
Local pid:
pubs:120192

Terms of use


Metrics



If you are the owner of this record, you can report an update to it here: Report update to this record

TO TOP